| theislab/single-cell-tutorial |
1566 |
30 |
22 |
491 |
| theislab/scarches |
404 |
10 |
67 |
70 |
| theislab/scgen |
343 |
7 |
31 |
69 |
| theislab/dca |
271 |
9 |
33 |
75 |
| theislab/paga |
242 |
8 |
24 |
35 |
| theislab/diffxpy |
206 |
0 |
108 |
22 |
| theislab/scCODA |
196 |
8 |
11 |
27 |
| theislab/sc-pert |
178 |
3 |
6 |
15 |
| theislab/kBET |
173 |
6 |
12 |
24 |
| theislab/nicheformer |
164 |
5 |
23 |
20 |
| theislab/chemCPA |
150 |
2 |
7 |
33 |
| theislab/cpa |
146 |
3 |
23 |
30 |
| theislab/sfaira |
136 |
6 |
167 |
11 |
| theislab/ncem |
118 |
4 |
34 |
13 |
| theislab/destiny |
103 |
3 |
31 |
13 |
| theislab/scib-pipeline |
82 |
4 |
16 |
29 |
| theislab/scib-reproducibility |
72 |
4 |
4 |
20 |
| theislab/scTab |
65 |
3 |
5 |
8 |
| theislab/trVAE |
63 |
4 |
3 |
12 |
| theislab/AutoGeneS |
62 |
4 |
7 |
10 |
| theislab/spatial_scog_workshop_2022 |
54 |
7 |
0 |
26 |
| theislab/neural_organoid_atlas |
48 |
4 |
3 |
7 |
| theislab/tcellmatch |
41 |
7 |
3 |
6 |
| theislab/vevo_Tahoe_100m_analysis |
41 |
2 |
4 |
4 |
| theislab/prophet |
40 |
3 |
6 |
3 |
| theislab/pseudodynamics |
40 |
5 |
0 |
6 |
| theislab/graphcompass |
39 |
1 |
4 |
2 |
| theislab/scvelo_notebooks |
36 |
0 |
5 |
12 |
| theislab/scArches-reproducibility |
34 |
2 |
5 |
0 |
| theislab/deepflow |
33 |
3 |
1 |
12 |
| theislab/scgen-reproducibility |
33 |
2 |
7 |
10 |
| theislab/atlas-feature-selection-benchmark |
32 |
1 |
3 |
5 |
| theislab/DeepRT |
31 |
0 |
11 |
10 |
| theislab/CFGen |
29 |
3 |
0 |
5 |
| theislab/batchglm |
28 |
1 |
47 |
9 |
| theislab/CellHermes |
27 |
0 |
1 |
6 |
| theislab/graph_abstraction |
27 |
2 |
0 |
10 |
| theislab/mubind |
27 |
2 |
29 |
0 |
| theislab/IMPA |
26 |
0 |
1 |
7 |
| theislab/moscot-framework_reproducibility |
25 |
1 |
1 |
7 |
| theislab/Covid_meta_analysis |
24 |
6 |
2 |
11 |
| theislab/interactive_plotting |
23 |
2 |
12 |
6 |
| theislab/scPoli_reproduce |
23 |
2 |
2 |
3 |
| theislab/inVAE |
20 |
2 |
1 |
3 |
| theislab/campa |
18 |
2 |
6 |
5 |
| theislab/cellrank_reproducibility |
17 |
1 |
1 |
8 |
| theislab/cellrank2_reproducibility |
15 |
0 |
2 |
3 |
| theislab/cpa-reproducibility |
15 |
1 |
1 |
3 |
| theislab/greatpy |
15 |
2 |
5 |
1 |
| theislab/moslin |
15 |
0 |
0 |
1 |
| theislab/multicpa |
15 |
1 |
1 |
3 |
| theislab/scanpy-in-R |
15 |
1 |
1 |
0 |
| theislab/ssl_in_scg |
15 |
0 |
1 |
2 |
| theislab/cross_system_integration |
13 |
1 |
15 |
2 |
| theislab/DeepCollisionalCrossSection |
13 |
3 |
1 |
6 |
| theislab/ncem_tutorials |
13 |
2 |
6 |
0 |
| theislab/FlatVI |
12 |
0 |
0 |
1 |
| theislab/GWAS-scRNAseq-Integration |
12 |
3 |
0 |
12 |
| theislab/MetaMap |
12 |
5 |
0 |
8 |
| theislab/mouse_cross-condition_pancreatic_islet_atlas |
12 |
1 |
0 |
5 |
| theislab/diffxpy_tutorials |
11 |
6 |
4 |
2 |
| theislab/expiMap_reproducibility |
11 |
3 |
3 |
4 |
| theislab/cellflow_reproducibility |
10 |
0 |
1 |
3 |
| theislab/gastrulation_analysis |
10 |
2 |
0 |
1 |
| theislab/scAnalysisTutorial |
10 |
1 |
0 |
3 |
| theislab/scProtVelo |
10 |
1 |
2 |
0 |
| theislab/superexacttestpy |
10 |
1 |
3 |
0 |
| theislab/2018_Angelidis |
9 |
2 |
0 |
6 |
| theislab/CellFlow2 |
9 |
0 |
0 |
2 |
| theislab/comparative_atlas |
9 |
1 |
0 |
0 |
| theislab/ehrapy-tutorials |
9 |
1 |
0 |
2 |
| theislab/enrichment_analysis_celltype |
9 |
3 |
0 |
4 |
| theislab/jump-cpg0016-segmentation |
9 |
0 |
2 |
0 |
| theislab/perturbation-metrics |
9 |
1 |
1 |
0 |
| theislab/scatac_poisson_reproducibility |
9 |
1 |
0 |
0 |
| theislab/scCODA_reproducibility |
9 |
3 |
0 |
1 |
| theislab/squidpy_reproducibility |
9 |
0 |
0 |
8 |
| theislab/trvaep |
9 |
1 |
0 |
6 |
| theislab/trVAE_reproducibility |
9 |
1 |
2 |
7 |
| theislab/moscot_benchmarks |
8 |
1 |
2 |
2 |
| theislab/ncem_benchmarks |
8 |
2 |
4 |
2 |
| theislab/PathReg |
8 |
2 |
1 |
0 |
| theislab/sc-best-practices-ce |
8 |
6 |
2 |
3 |
| theislab/scachepy |
8 |
3 |
3 |
1 |
| theislab/tissue_tensorflow |
8 |
2 |
0 |
0 |
| theislab/2019_Strunz |
7 |
3 |
1 |
10 |
| theislab/2020_Mayr |
7 |
4 |
0 |
8 |
| theislab/pancreatic-endocrinogenesis |
7 |
1 |
0 |
7 |
| theislab/deconvATAC |
6 |
0 |
1 |
2 |
| theislab/disent |
6 |
1 |
0 |
0 |
| theislab/intercode |
6 |
1 |
1 |
1 |
| theislab/kbranches |
6 |
5 |
0 |
0 |
| theislab/multimil_reproducibility |
6 |
3 |
4 |
1 |
| theislab/sc_mae |
6 |
1 |
0 |
0 |
| theislab/sfaira_tutorials |
6 |
2 |
4 |
2 |
| theislab/singlecell_proteomics |
6 |
3 |
6 |
2 |
| theislab/spapros-pipeline |
6 |
0 |
0 |
0 |
| theislab/task-dge-perturbation-prediction-analysis |
6 |
2 |
0 |
2 |
| theislab/theislab.github.io |
6 |
0 |
9 |
0 |
| theislab/2022_Tritschler_pancreas_cross_species |
5 |
2 |
0 |
1 |
| theislab/flowVI |
5 |
2 |
1 |
0 |
| theislab/HumanCytokineDict |
5 |
2 |
1 |
2 |
| theislab/InterpretableAutoencoders |
5 |
2 |
0 |
0 |
| theislab/LODE |
5 |
0 |
9 |
0 |
| theislab/pertpy-reproducibility |
5 |
2 |
0 |
3 |
| theislab/scanpy-demo-czbiohub |
5 |
3 |
0 |
5 |
| theislab/scPoli_legacy |
5 |
4 |
0 |
0 |
| theislab/scRatio |
5 |
0 |
0 |
0 |
| theislab/spatial_atlas_ssl |
5 |
1 |
0 |
0 |
| theislab/archmap |
4 |
2 |
4 |
0 |
| theislab/cellucid |
4 |
0 |
0 |
0 |
| theislab/covid-perturbation |
4 |
1 |
0 |
0 |
| theislab/DRVI_reproducibility |
4 |
3 |
0 |
1 |
| theislab/ehrapy-reproducibility |
4 |
0 |
1 |
0 |
| theislab/multigrate_reproducibility |
4 |
0 |
0 |
1 |
| theislab/pig-embryo-ana |
4 |
1 |
0 |
0 |
| theislab/scproto |
4 |
2 |
0 |
1 |
| theislab/sc_analysis_template |
4 |
1 |
0 |
0 |
| theislab/svaeligr |
4 |
2 |
0 |
0 |
| theislab/txsim |
4 |
2 |
41 |
2 |
| theislab/cellrank_reproducibility_preprint |
3 |
0 |
0 |
0 |
| theislab/covid_macrophages_integration |
3 |
3 |
0 |
5 |
| theislab/extended-single-cell-best-practices-container |
3 |
1 |
2 |
1 |
| theislab/feature-attribution-sc |
3 |
1 |
8 |
1 |
| theislab/HRCA-reproducibility |
3 |
4 |
0 |
1 |
| theislab/interaction-tools |
3 |
2 |
0 |
0 |
| theislab/masterpraktikum_ssl_segmentation |
3 |
2 |
0 |
2 |
| theislab/moscot_not |
3 |
1 |
8 |
1 |
| theislab/multires-consensus-clustering |
3 |
2 |
9 |
0 |
| theislab/nbconvertR |
3 |
1 |
1 |
2 |
| theislab/sample-prediction-pipeline |
3 |
0 |
0 |
0 |
| theislab/spapros_reproducibility |
3 |
0 |
0 |
1 |
| theislab/tardis |
3 |
1 |
0 |
1 |
| theislab/tissue |
3 |
2 |
0 |
0 |
| theislab/2020_iPS_Lung_Differentiation |
2 |
3 |
0 |
2 |
| theislab/2021_Aliluev_Tritschler_gut_HFD |
2 |
2 |
0 |
1 |
| theislab/bartseq-pipeline |
2 |
2 |
0 |
3 |
| theislab/campa_ana |
2 |
2 |
0 |
0 |
| theislab/epicardiods_analysis |
2 |
1 |
1 |
0 |
| theislab/flexible_priors |
2 |
0 |
0 |
0 |
| theislab/gut_lineage |
2 |
1 |
0 |
3 |
| theislab/HPA_reproducibility |
2 |
1 |
0 |
1 |
| theislab/LineagePulse |
2 |
3 |
0 |
0 |
| theislab/LungInjuryRegeneration |
2 |
6 |
0 |
0 |
| theislab/scanpy_squidpy_demo_2021 |
2 |
2 |
0 |
1 |
| theislab/scPortrait_ot |
2 |
1 |
0 |
0 |
| theislab/sctram |
2 |
1 |
0 |
0 |
| theislab/2021_PRMT7_regulates_Monocyte_Extravasation |
1 |
2 |
0 |
2 |
| theislab/archmap_data |
1 |
0 |
2 |
0 |
| theislab/astrocytes_reprogramming_analysis |
1 |
3 |
0 |
0 |
| theislab/augurpy |
1 |
0 |
10 |
0 |
| theislab/autoencoderPS |
1 |
1 |
0 |
2 |
| theislab/bartSeq |
1 |
3 |
1 |
5 |
| theislab/bindome |
1 |
2 |
5 |
1 |
| theislab/collideseq_reproducibility |
1 |
1 |
0 |
0 |
| theislab/countae |
1 |
2 |
0 |
0 |
| theislab/ehrapy-cli |
1 |
1 |
0 |
0 |
| theislab/ehrapy-site |
1 |
1 |
0 |
0 |
| theislab/ifcseq |
1 |
1 |
0 |
1 |
| theislab/pancreas-targeted_pharmacology |
1 |
5 |
1 |
2 |
| theislab/PDAC |
1 |
1 |
0 |
0 |
| theislab/rapids-singlecell-reproducibility |
1 |
0 |
0 |
0 |
| theislab/tissue_reproducibility |
1 |
2 |
0 |
0 |
| theislab/transcription_factor_activity |
1 |
0 |
6 |
1 |
| theislab/unbalanced_monge_maps_single_cell |
1 |
0 |
0 |
0 |
| theislab/zebrafish_bipolarity |
1 |
2 |
0 |
1 |
| theislab/2015-grn-inference |
0 |
1 |
0 |
0 |
| theislab/2020_Inhibition_LTbetaR-signalling |
0 |
2 |
0 |
3 |
| theislab/2022_Bakhti_pancreas_Syt13 |
0 |
1 |
0 |
0 |
| theislab/2025_cpmeasure_performance_eval |
0 |
0 |
0 |
0 |
| theislab/annbatch_paper |
0 |
0 |
0 |
0 |
| theislab/archmap_admin |
0 |
1 |
0 |
0 |
| theislab/archmap_doc |
0 |
2 |
0 |
0 |
| theislab/consensus-clustering-evaluation |
0 |
2 |
0 |
0 |
| theislab/dali |
0 |
5 |
0 |
1 |
| theislab/DRVI_tutorials |
0 |
1 |
2 |
1 |
| theislab/edgepy |
0 |
2 |
0 |
0 |
| theislab/ELS_analysis |
0 |
2 |
0 |
1 |
| theislab/GoBI_single_cell |
0 |
1 |
0 |
0 |
| theislab/hadge-reproducibility |
0 |
1 |
0 |
0 |
| theislab/icml_cbw_2022_clcvae |
0 |
2 |
0 |
0 |
| theislab/imseq-analysis |
0 |
0 |
0 |
0 |
| theislab/integraph |
0 |
1 |
4 |
0 |
| theislab/inVAE_reproducibility |
0 |
2 |
0 |
0 |
| theislab/ipsc_ipd_analysis |
0 |
1 |
0 |
0 |
| theislab/LungAgingAtlas |
0 |
3 |
0 |
0 |
| theislab/MetaMap-web |
0 |
2 |
2 |
0 |
| theislab/MRGR_stress_analysis |
0 |
0 |
0 |
0 |
| theislab/mubind-benchmark |
0 |
2 |
19 |
0 |
| theislab/multicpa-reproducibility |
0 |
1 |
0 |
0 |
| theislab/organoid_dexamethasone_stimulation |
0 |
1 |
0 |
1 |
| theislab/pdac_analysis |
0 |
1 |
0 |
0 |
| theislab/prophet-reproducibility |
0 |
3 |
0 |
0 |
| theislab/quicat_reproducibility |
0 |
1 |
0 |
0 |
| theislab/reproducability_AutoGeneS |
0 |
1 |
0 |
0 |
| theislab/reproducibility_AutoGeneS |
0 |
1 |
0 |
0 |
| theislab/scanpy.org |
0 |
5 |
1 |
0 |
| theislab/scanpy_neighbors |
0 |
1 |
0 |
1 |
| theislab/scarches_notebooks |
0 |
1 |
0 |
0 |
| theislab/scarches_protocol |
0 |
1 |
2 |
0 |
| theislab/sc_ketamine_analysis |
0 |
2 |
0 |
0 |
| theislab/sfaira-portal |
0 |
2 |
2 |
0 |
| theislab/sfaira-site |
0 |
1 |
0 |
0 |
| theislab/sfaira_benchmarks |
0 |
1 |
0 |
0 |
| theislab/sfaira_extension |
0 |
1 |
1 |
0 |
| theislab/spapros-smk |
0 |
1 |
0 |
1 |
| theislab/spatial_pancreas |
0 |
1 |
0 |
0 |
