Last updated: 2020-11-24
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Knit directory: interaction-tools/
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Ignored: data/cellphonedb/
Ignored: data/celltalker/
Ignored: output/14-CellChat.Rmd/
Ignored: output/15-talklr.Rmd/
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Modified: output/11-CellPhoneDB.Rmd/count_network.txt
Modified: output/11-CellPhoneDB.Rmd/dotplot.png
Modified: output/11-CellPhoneDB.Rmd/heatmap_counts.png
Modified: output/11-CellPhoneDB.Rmd/heatmap_logcounts.png
Modified: output/11-CellPhoneDB.Rmd/interactions_count.txt
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| File | Version | Author | Date | Message |
|---|---|---|---|---|
| Rmd | 903c6b4 | Luke Zappia | 2020-11-24 | Use HTML navbar |
| Rmd | c6b67b8 | Luke Zappia | 2020-11-24 | Update index, README, LICENSE |
| html | b305bfe | Luke Zappia | 2020-11-10 | Add celltalker to drake |
| html | 38ee322 | Luke Zappia | 2020-11-10 | Add scTHI to drake |
| html | d85e512 | Luke Zappia | 2020-11-09 | Build CiteFuse |
| html | 9940762 | Luke Zappia | 2020-09-24 | Add talklr to drake |
| html | f017448 | Luke Zappia | 2020-07-29 | Setup CellChat |
| html | 259369a | Luke Zappia | 2020-06-04 | Rebuild |
| html | 3feea4c | Luke Zappia | 2020-05-27 | Add chunk timing to documents |
| html | d3bd2d6 | Luke Zappia | 2020-05-27 | Add NicheNet to drake |
| Rmd | cc8947c | Luke Zappia | 2020-05-08 | Add ToC to index |
| html | cc8947c | Luke Zappia | 2020-05-08 | Add ToC to index |
| html | 7bd35b2 | Luke Zappia | 2020-05-06 | Rebuild cellphonedb |
| html | 0940458 | Luke Zappia | 2019-12-13 | Set up Drake |
| Rmd | 489b72c | Luke Zappia | 2019-12-13 | Start workflowr project. |
This site contains information about computational tools for identifying ligand-receptor interactions from single-cell RNA-sequencing data and examples of how they are used. For the most part this involves working through the tutorials and vignettes provided by the package authors.
As well as the authors of the various analysis packages we would like to acknowledge the authors of all the packages used to build this website particularly {workflowr}, {drake}, {rmarkdown}, {knitr} and the various {tidyverse} packages.
The text for this website is covered by a Creative Commons Attribution 4.0 International (CC BY 4.0) license and the code by the MIT license. Code in the various packages, tutorials and examples may be covered by other licenses so please refer to those for details.
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setting value
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date 2020-11-24
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